You can go ahead and prune off anything that did not sprout, but I would leave the main pruning for when the tree is dormant. You could pinch some new growth if you wanted, or snip a few live twigs, but much better to wait.
If you want the tree to grow up and out, and not have so much leaf mass in its lower area this will take time. Prune to shape some main branches, but do not remove much of the lower growth yet. The lower growth is protecting the bark from sunburn. Each year you can take off a little bit of the lower growth to show off the trunk. The top will eventually get wide enough to provide the shade. Similarly, do not thin the upper branches all in one go. Do this also over several years to minimize sun burn.
If you want to keep it about the size it is then prune more heavily, especially the longest branches. This would turn it into a 'lollipop on a stick'. Not a nice way to prune a Japanese Maple.
Suggest you google Acer palmatum and look at images of how others have been pruned.
If you want the tree to grow up and out, and not have so much leaf mass in its lower area this will take time. Prune to shape some main branches, but do not remove much of the lower growth yet. The lower growth is protecting the bark from sunburn. Each year you can take off a little bit of the lower growth to show off the trunk. The top will eventually get wide enough to provide the shade. Similarly, do not thin the upper branches all in one go. Do this also over several years to minimize sun burn.
If you want to keep it about the size it is then prune more heavily, especially the longest branches. This would turn it into a 'lollipop on a stick'. Not a nice way to prune a Japanese Maple.
Suggest you google Acer palmatum and look at images of how others have been pruned.