Here's and update on what happened:
So I ended up falling asleep last night after I watched her in labor for about an hour. I had actually transfered her into my old 5 gallon to i could provide her with enough space. From what I could tell all of the ones were dead. They came out white and completely lifeless. Never the less I left a big ball of java moss just in case.
And guess what? I wake up this morning and amongst all the casualties I see 3 little fry swimming around happily in the java moss!
I already scooped out the dead ones and moved the mom back in her tank. I'm most definitely going to keep and close eye on these guys. (: